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Species belonging to selected taxon:
Populus trichocarpa
ABOUT THIS RECORD
ID:
MNEST053234
species:
Populus trichocarpa
source:
PMRD, original name:
ptc-miRf11412-akr
Taxonomy by NCBI:
Populus trichocarpa
Populus
Saliceae
Salicaceae
Malpighiales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CCGATGGAATTACCGACGGA
miRNA*
CGTCGGTAAATCCGTCGGTA
mismatches:
1
bulges:
0
View larger
pre-miRNA
TTA
CCGATGGAATTACCGACGGA
ATAATTAAAAAAATATTAATATTCAATTATC
CGTCGGTAAATCCGTCGGTA
A
dot-bracket secondary structure
.((
((((((((.(((((((((((
.(((((..................)))))))
))))))))).))))))))))
.
SIMILARITIES
miRBase
no hits
PMRD
ptc-miRf11977-akr
:
1e-24
microPC
no hits
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction:
true miRNA
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